The detailed information of tRNA gene sequence


Sequence ID>WENV170977513
Genome IDMTKZ01025282
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2290
End posion on genome 2213
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
caaaaccggt
tRNA gene sequence 
CGGGATGTAGCGCAGTCCGGTTAGCGCGCTCGGTTCGGGACCGAGAAGTCGGAGGTTCAA
ATCCTCTCATCCCGACCA
Downstream region at tRNA end position 
ttttcaattt
Secondary structure (Cloverleaf model)
>WENV170977513	Pro	CGG
                   t      ACCA ttttcaattt
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T C T C C     A
    C T G A        A      + | | | |     A
  C         C G C G       G G A G G     C
  G         | | | |                 T T
  G         G C G C
    T T A          G     AAGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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