The detailed information of tRNA gene sequence


Sequence ID>WENV170977519
Genome IDMTKZ01025374
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 4131
End posion on genome 4056
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
aagaaggggt
tRNA gene sequence 
GCGCCTGTAGCTCAATGGACAGAGCCGCGGACTTCGGATCCGAAGGTTGGGGGTTCAACT
CCCTCCAGGCGCGCCA
Downstream region at tRNA end position 
ttttttttct
Secondary structure (Cloverleaf model)
>WENV170977519	Arg	TCG
                   t      GCCA ttttttttct
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T C
                    T     C T C C C     A
      T A A        A      | + | | |     A
    G       C T C G       G G G G G     C
    G       | | | |                 T T
    A       G A G C
      C A          C     AGGTT
                    G   A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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