The detailed information of tRNA gene sequence


Sequence ID>WENV170977533
Genome IDMTKZ01025652
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2391
End posion on genome 2465
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
atggtattgt
tRNA gene sequence 
ACCGGCGTAGCTCAAAGGTAGAGTAGCGGTCTCCAAAACCGTTGGTTAGAGGTTCGAGTC
CTCTCGCCGGTGCCA
Downstream region at tRNA end position 
atagctcccc
Secondary structure (Cloverleaf model)
>WENV170977533	Trp	CCA
                   t      GCCA atagctcccc
                     A - T
                     C - G
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T C T C C     A
        A A        A      | | | | |     G
      A     C T C G       A G A G G     C
      G     | | | +                 T T
      G     G A G T
        T A        A     TGGTT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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