The detailed information of tRNA gene sequence


Sequence ID>WENV170977539
Genome IDMTKZ01025764
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1803
End posion on genome 1726
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttaatgcgct
tRNA gene sequence 
GGGGGCGTAGTTCAGTTTGGTTAGAACGTCTGCCTGTCACGCAGAAGGCCGCGAGTTCGA
GTCTCGTCGCTCCCGCCA
Downstream region at tRNA end position 
ttttcaaaag
Secondary structure (Cloverleaf model)
>WENV170977539	Asp	GTC
                   t      GCCA ttttcaaaag
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C          T G
                    T     T G C T C     A
    T T G A        A      + | | | |     G
  T         C T T G       G C G A G     C
  G         | | | |                 T T
  G         G A A C
    T T A          G     AGGCC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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