The detailed information of tRNA gene sequence


Sequence ID>WENV170977540
Genome IDMTKZ01025772
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1422
End posion on genome 1496
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tgccgcttcg
tRNA gene sequence 
GGGCCCATAGCTCAGCTGGTTAGAGCGCTGCCTTCACACGGCAGAGGTCAGAGGTTCGAG
TCCTCTTGGGCCCACtc
Downstream region at tRNA end position 
cacgttgcgg
Secondary structure (Cloverleaf model)
>WENV170977540	Val	CAC
                   g      ACtc cacgttgcgg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     T C T C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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