The detailed information of tRNA gene sequence


Sequence ID>WENV170977542
Genome IDMTKZ01025874
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 26565
End posion on genome 26642
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ggctcgtcta
tRNA gene sequence 
CGGGGCGTAGCGCAGTCTGGCTAGCGCACCTGCCTTGGGAGCAGGGGGTCGGAGGTTCAA
ATCCTCTCGCCCCGACCA
Downstream region at tRNA end position 
agcaggatgc
Secondary structure (Cloverleaf model)
>WENV170977542	Pro	TGG
                   a      ACCA agcaggatgc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
    C T G A        A      + | | | |     A
  T         C G C G       G G A G G     C
  G         | | | |                 T T
  G         G C G C
    C T A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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