The detailed information of tRNA gene sequence


Sequence ID>WENV170977562
Genome IDMTKZ01026502
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3546
End posion on genome 3634
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgcaaggatt
tRNA gene sequence 
GGAGAGATCGCATAGCTGGTCTAGTGCGCGCGCTTGGAGAGCGCGTATATCGAAAGGTAT
CGTGGGTTCGAATCCCACTCTCTCCGCAA
Downstream region at tRNA end position 
aaataaaaac
Secondary structure (Cloverleaf model)
>WENV170977562	Ser	GGA
                   t      GCAA aaataaaaac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
    T C G A        C      | | | | |     G
  G         T A C G       G T G G G     C
  G         + | | |                 T T
  T         G T G C
    C T A          G     TATATCGAAAGGTATC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  T       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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