The detailed information of tRNA gene sequence


Sequence ID>WENV170977564
Genome IDMTKZ01026515
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 197
End posion on genome 122
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tcgcagtcgC
tRNA gene sequence 
GGGGGCGTAGCTCAGCTGGTTAGAGCGCCGGCCTGTCACGCCGGAGGTCGCGAGTTCAAG
TCTCGTCGTCCCCGTat
Downstream region at tRNA end position 
tgtcctccgt
Secondary structure (Cloverleaf model)
>WENV170977564	Asp	GTC
                   C      GTat tgtcctccgt
                     G - C
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C          T G
                    T     T G C T C     A
      C G A        A      + | | | |     A
    T       C T C G       G C G A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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