The detailed information of tRNA gene sequence


Sequence ID>WENV170977566
Genome IDMTKZ01026541
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 4309
End posion on genome 4384
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
cttcgttcgt
tRNA gene sequence 
GGCGGATTCGTCTAGGGGCCCAGGATATCGCCCTCTCAAGGCGGAGACACGGGTTCGAAT
CCCGTATCCGCTACCA
Downstream region at tRNA end position 
cgcaaagccc
Secondary structure (Cloverleaf model)
>WENV170977566	Glu	CTC
                   t      ACCA cgcaaagccc
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     T G C C C     A
      G G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | +                 T T
    C       G G A T
      C C A        A     AGAC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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