The detailed information of tRNA gene sequence


Sequence ID>WENV170977578
Genome IDMTKZ01026835
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 10336
End posion on genome 10411
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
cggcgttaat
tRNA gene sequence 
GGGCCTGTAGCTCAATTGGGAGAGCGCTTGAATGGCATTCAAGAGGTAAGGGGTTCGAAT
CCCCTCAGGTCCACTA
Downstream region at tRNA end position 
ccggcaacca
Secondary structure (Cloverleaf model)
>WENV170977578	Ala	GGC
                   t      ACTA ccggcaacca
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     T C C C C     A
      T A A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTA
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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