The detailed information of tRNA gene sequence


Sequence ID>WENV170977612
Genome IDMTKZ01027683
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 5677
End posion on genome 5765
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
catttgcgcC
tRNA gene sequence 
GGAGAGATGGCAGAGCGGTCGAATGCGGCGGTCTTGAAAACCGTTGACTCAAAAGGTCCG
GGGGTTCGAATCCCTCTCTCTCCGCCC
Downstream region at tRNA end position 
Aaacccggtg
Secondary structure (Cloverleaf model)
>WENV170977612	Ser	TGA
                   C      GCCC Aaacccggtg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TGACTCAAAAGGTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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