The detailed information of tRNA gene sequence


Sequence ID>WENV170977616
Genome IDMTKZ01027723
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 4035
End posion on genome 3961
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cacaacatcT
tRNA gene sequence 
GGGCCTATAGCTCAACGGTCAGAGCAGCGCTCTCATAAAGCGTTGGTTACAGGTTCGAAT
CCTGTTGGGCCCATgt
Downstream region at tRNA end position 
tttattgaat
Secondary structure (Cloverleaf model)
>WENV170977616	Met	CAT
                   T      ATgt tttattgaat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T A
                    T     T G T C C     A
      C A A        A      | | | | |     G
    G       C T C G       A C A G G     C
    G       | | | |                 T T
    T       G A G C
      C A          A     TGGTT
                    G + T
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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