The detailed information of tRNA gene sequence


Sequence ID>WENV170977631
Genome IDMTKZ01027993
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1587
End posion on genome 1513
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cacacctctt
tRNA gene sequence 
GGGCGGTTAACTCAGCGGGAGAGTGCTACCTTCACACGGTAGAAGTCACTGGTTCAATCC
CAGTACCGCCTACCA
Downstream region at tRNA end position 
tgaatatccg
Secondary structure (Cloverleaf model)
>WENV170977631	Val	CAC
                   t      ACCA tgaatatccg
                     G + T
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          C T
                    T     T G A C C     A
        G A        A      | | | | |     A
      C     C T C A       A C T G G     C
      G     | | | |                 T T
      G     G A G T
        G A        G     AAGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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