The detailed information of tRNA gene sequence


Sequence ID>WENV170977652
Genome IDMTKZ01028452
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2931
End posion on genome 2855
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tcctttcgcg
tRNA gene sequence 
GGGGGCGTAGCTCAGCTGGTTAGAGCGCCGGCCTGTCACGCCGGAGGCCGCGGGTTCGAG
TCCCGTCGCTCCCGCCA
Downstream region at tRNA end position 
ctcgccaccg
Secondary structure (Cloverleaf model)
>WENV170977652	Asp	GTC
                   g      GCCA ctcgccaccg
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C          T G
                    T     T G C C C     A
      C G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGCC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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