The detailed information of tRNA gene sequence


Sequence ID>WENV170977672
Genome IDMTKZ01028829
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 183
End posion on genome 258
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gtcctcgtgc
tRNA gene sequence 
AGGGGTGTAGCACAATGGCTAGTGCAGCGGCCTCCAAAGCCGAAGGTTGGGGGTTCGAGT
CCCTCCACCCCTGCCA
Downstream region at tRNA end position 
ttttttatat
Secondary structure (Cloverleaf model)
>WENV170977672	Trp	CCA
                   c      GCCA ttttttatat
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    G       C A C G       G G G G G     C
    G       | | | |                 T T
    C       G T G C
      T A          A     AGGTT
                    G   A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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