The detailed information of tRNA gene sequence


Sequence ID>WENV170977673
Genome IDMTKZ01028831
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2359
End posion on genome 2270
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
agtttcattt
tRNA gene sequence 
GGAGAGGTGCCGGAGCGGTTGAACGGGGCGGTCTCGAAAACCGTTACAGCCTCATGGCTG
TCGTGGGTTCGAATCCCACCTTCTCCGCAA
Downstream region at tRNA end position 
aacacaaacc
Secondary structure (Cloverleaf model)
>WENV170977673	Ser	CGA
                   t      GCAA aacacaaacc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G G C C       G T G G G     C
    G         | | |                 T T
    T       A C G G
      T G A        G     TACAGCCTCATGGCTGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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