The detailed information of tRNA gene sequence


Sequence ID>WENV170977674
Genome IDMTKZ01028845
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3127
End posion on genome 3037
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgccggtgat
tRNA gene sequence 
GGAGAGTTGGCTGAGTGGTCTAAGGCGCACGACTGGAAATCGTGTTCGGGCTTATACCCC
GACCAGGGTTCAAATCCCTGACTCTCCGCCA
Downstream region at tRNA end position 
aaatctgcgg
Secondary structure (Cloverleaf model)
>WENV170977674	Ser	GGA
                   t      GCCA aaatctgcgg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     G T C C C     A
      T G A        G      | | | | |     A
    G       G T C G       C A G G G     C
    G         + | |                 T T
    T       A G G C
      C T A        G     TTCGGGCTTATACCCCGAC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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