The detailed information of tRNA gene sequence


Sequence ID>WENV170977682
Genome IDMTKZ01028943
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3328
End posion on genome 3404
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cactggtatt
tRNA gene sequence 
GGAGTCGTAGTTCAGTTGGTTAGAACGCTGCCCTGTCACGGCAGAGGTCGCGGGTTCGAG
TCCCGTCGACTCCGCCA
Downstream region at tRNA end position 
attttcactt
Secondary structure (Cloverleaf model)
>WENV170977682	Asp	GTC
                   t      GCCA attttcactt
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     C - G
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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