The detailed information of tRNA gene sequence


Sequence ID>WENV170977686
Genome IDMTKZ01029074
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3209
End posion on genome 3300
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tcggatcaag
tRNA gene sequence 
GGAGAAATGGCAGAGCGGTCGAATGCGGCGGTCTTGAAAACCGTTGTTCCGCCATCGCGG
AACCGGGGGTTCGAATCCCTCTTTCTCCGCCA
Downstream region at tRNA end position 
aagctaaatg
Secondary structure (Cloverleaf model)
>WENV170977686	Ser	TGA
                   g      GCCA aagctaaatg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TGTTCCGCCATCGCGGAACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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