The detailed information of tRNA gene sequence


Sequence ID>WENV170977692
Genome IDMTKZ01029297
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1863
End posion on genome 1774
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gttcacgttg
tRNA gene sequence 
GGAGAGATGTTCGAGTGGTTTATGGAGCTGGTCTTGAAAACCAGAGGCGTGTTACAGCGT
CCGAGGGTTCGAATCCCTCTCTCTCCTCCA
Downstream region at tRNA end position 
tataatttca
Secondary structure (Cloverleaf model)
>WENV170977692	Ser	TGA
                   g      TCCA tataatttca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C T T       G A G G G     C
    G       + | + |                 T T
    T       T G G A
      T T A        G     AGGCGTGTTACAGCGTCC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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