The detailed information of tRNA gene sequence


Sequence ID>WENV170977693
Genome IDMTKZ01029297
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1739
End posion on genome 1647
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agtagtccaa
tRNA gene sequence 
GGAGAAGTACTCAAGTTTGGTCGAAGAGGCGCCCCTGCTAAGGGCGTAGGTCGGGAAACT
GGCGCGAGGGTTCGAATCCCTCCTTCTCCGCCA
Downstream region at tRNA end position 
tctgaaagat
Secondary structure (Cloverleaf model)
>WENV170977693	Ser	GCT
                   a      GCCA tctgaaagat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
    T T G A        A      | | | | |     G
  T         A C T C       G A G G G     C
  G           | | |                 T T
  G         A G A G
    T C G A        G     TAGGTCGGGAAACTGGCGC
                    C - G
                    G - C
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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