The detailed information of tRNA gene sequence


Sequence ID>WENV170977717
Genome IDMTKZ01029954
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 180
End posion on genome 108
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
aataaaacct
tRNA gene sequence 
GCGGGTGTAGTTCAATTGGTAGAACGTCTCCTTGCCAAGGAGAAGGTCGTGAGTTCGAGC
CTCATCGCCCGCTtac
Downstream region at tRNA end position 
ttcaaagctg
Secondary structure (Cloverleaf model)
>WENV170977717	Gly	GCC
                   t      Ttac ttcaaagctg
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          C G
                    T     T A C T C     A
      T A A        A      + | | | |     G
    T       C T T G       G T G A G     C
    G       | | | |                 T T
    G       G A A C
      T A          G     AGGTC
                    T - A
                    C - G
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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