The detailed information of tRNA gene sequence


Sequence ID>WENV170977719
Genome IDMTKZ01030008
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1142
End posion on genome 1065
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ttaaatctat
tRNA gene sequence 
CGGGGCGTAGCGCAGTCTGGTTAGCGCGCTTGACTCGGGTTCAAGAGGCCGGAGGTTCAA
ATCCTCTCGCCCCGACCA
Downstream region at tRNA end position 
tattaaatgt
Secondary structure (Cloverleaf model)
>WENV170977719	Pro	CGG
                   t      ACCA tattaaatgt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
    C T G A        A      + | | | |     A
  T         C G C G       G G A G G     C
  G         | | | |                 T T
  G         G C G C
    T T A          G     AGGCC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  C       T
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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