The detailed information of tRNA gene sequence


Sequence ID>WENV170977733
Genome IDMTKZ01030307
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 5823
End posion on genome 5900
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tgaacacgct
tRNA gene sequence 
GGGGGCGTAGTTCAGTTTGGTTAGAACGTCTGCCTGTCACGCAGAAGGCCGCGAGTTCGA
GTCTCGTCGCTCCCGCCA
Downstream region at tRNA end position 
tcatactcgg
Secondary structure (Cloverleaf model)
>WENV170977733	Asp	GTC
                   t      GCCA tcatactcgg
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C          T G
                    T     T G C T C     A
    T T G A        A      + | | | |     G
  T         C T T G       G C G A G     C
  G         | | | |                 T T
  G         G A A C
    T T A          G     AGGCC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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