The detailed information of tRNA gene sequence


Sequence ID>WENV170977738
Genome IDMTKZ01030467
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2216
End posion on genome 2141
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
gagtaaacaa
tRNA gene sequence 
GGGCCCATAGCGCAGTTGGGAGCGCGTCTCAATGGCATTGAGAAGGCCGAGAGTTCGAAT
CTCTCTGGGTCCACTA
Downstream region at tRNA end position 
aaagcagccg
Secondary structure (Cloverleaf model)
>WENV170977738	Ala	GGC
                   a      ACTA aaagcagccg
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     C T C T C     A
      T G A        A      | | | | |     G
    T       C G C G       G A G A G     C
    G       | | | |                 T T
    G       G C G C
      G A          G     AGGCC
                    T - A
                    C - G
                    T - A
                    C - G
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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