The detailed information of tRNA gene sequence


Sequence ID>WENV170977762
Genome IDMTKZ01031040
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 749
End posion on genome 834
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ctatatccgg
tRNA gene sequence 
GCCGGGGTAGTCTAGACCGGTAAGGCGGTGGCCTTGAAAGCCACTGGTGCCATGCACCTC
AAGAGTTCAAATCTCTTCCCCGGCGCtc
Downstream region at tRNA end position 
tcactttttt
Secondary structure (Cloverleaf model)
>WENV170977762	Ser	TGA
                   g      GCtc tcactttttt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T T C T C     A
      A G A        A      | | | | |     A
    C       T C T G       A A G A G     C
    C       | | + |                 T T
    G       A G G C
      G T A        G     TGGTGCCATGCACCTC
                    G - C
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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