The detailed information of tRNA gene sequence


Sequence ID>WENV170977775
Genome IDMTKZ01031221
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 6206
End posion on genome 6295
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctgcgtactg
tRNA gene sequence 
GGAGACGTCGCATAGTCCGGTCGAGTGCACCACCCTGCTAAGGTGGAGTCCCCTCACGGG
GACCGCGGGTTCAAATCCCGCCGTCTCCGCtc
Downstream region at tRNA end position 
tgagaacccc
Secondary structure (Cloverleaf model)
>WENV170977775	Ser	GCT
                   g      GCtc tgagaacccc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C G C C C     A
    C T G A        C      | | | | |     A
  C         T A C G       G C G G G     C
  G         + | | |                 T T
  G         G T G C
    T C G A        A     AGTCCCCTCACGGGGACC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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