The detailed information of tRNA gene sequence


Sequence ID>WENV170977778
Genome IDMTKZ01031289
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3728
End posion on genome 3804
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttttgcaaat
tRNA gene sequence 
GGAGTGGTAGCTCAGTTGGTTAGAGCATCGCACTGTCACTGCGAAGGTTGCGGGTTCGAC
CCCCGTCCACTCCGCCA
Downstream region at tRNA end position 
ttttcaacat
Secondary structure (Cloverleaf model)
>WENV170977778	Asp	GTC
                   t      GCCA ttttcaacat
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G - C          C C
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTT
                    T - A
                    C - G
                    G - C
                    C - G
                    A - T
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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