The detailed information of tRNA gene sequence


Sequence ID>WENV170977805
Genome IDMTKZ01032176
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 857
End posion on genome 782
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ctttgttccc
tRNA gene sequence 
GGGGGATTAGCTCAGCTGGGAGAGCGCCGCCCTTGCAAGGCGGAGGTCGCCGGTTCGATT
CCGGTATCCTCCATCA
Downstream region at tRNA end position 
tcttttccat
Secondary structure (Cloverleaf model)
>WENV170977805	Ala	TGC
                   c      ATCA tcttttccat
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     A - T
                     T - A          T T
                    T     T G G C C     A
      C G A        A      + | | | |     G
    T       C T C G       G C C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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