The detailed information of tRNA gene sequence


Sequence ID>WENV170977851
Genome IDMTKZ01033617
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1529
End posion on genome 1453
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gacagcccac
tRNA gene sequence 
AGGCCAGTAGCTCAATTTGGCAGAGCACCGGTCTCCAAAACCGGTTGTTGGGGGTTCAAG
TCCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
cctcgcgcga
Secondary structure (Cloverleaf model)
>WENV170977851	Trp	CCA
                   c      GCCA cctcgcgcga
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     A
    T       C T C G       G G G G G     C
    T       | | | |                 T T
    G       G A G C
      G C A        A     TTGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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