The detailed information of tRNA gene sequence


Sequence ID>WENV170977867
Genome IDMTKZ01033972
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1570
End posion on genome 1494
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
acataaatgc
tRNA gene sequence 
GGCCTGGTAGTTCAGCTGGTTAGAATGCCAGCCTGTCACGCTGGAGGTCGAGGGTTCGAG
TCCCTTCCAGGTCGCCA
Downstream region at tRNA end position 
atttaatata
Secondary structure (Cloverleaf model)
>WENV170977867	Asp	GTC
                   c      GCCA atttaatata
                     G - C
                     G + T
                     C - G
                     C - G
                     T - A
                     G - C
                     G - C          T G
                    T     T T C C C     A
      C G A        A      + | | | |     G
    T       C T T G       G A G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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