The detailed information of tRNA gene sequence


Sequence ID>WENV170977899
Genome IDMTKZ01034906
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1440
End posion on genome 1354
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GCGGGGTTTGCCAAGCTGGCCAAAGGCGCGGGACTTAAGATCCCGTCTCGCAGGAGTTCG
CGGGTTCGAATCCCGTACCCCGCATCA
Downstream region at tRNA end position 
ttgatatcga
Secondary structure (Cloverleaf model)
>WENV170977899	Leu	TAA
                   n      ATCA ttgatatcga
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     T G C C C     A
    T C G A        T      + | | | |     G
  G         A C C G       G C G G G     C
  G           | | |                 T T
  C         A G G C
    C A A          G     TCTCGCAGGAGTTC
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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