The detailed information of tRNA gene sequence


Sequence ID>WENV170977902
Genome IDMTKZ01034921
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1103
End posion on genome 1193
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aattgtactt
tRNA gene sequence 
GGAGGGATACCGAAGTGGCCATAACGGGCTGGTCTCGAAAACCAAGCGTGGCGCAAGTCA
CACGAGAGTTCGAATCTCTCTCCCTCCGCCA
Downstream region at tRNA end position 
ggaaaaatac
Secondary structure (Cloverleaf model)
>WENV170977902	Ser	CGA
                   t      GCCA ggaaaaatac
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C T C     A
    G T G A        A      | | | | |     G
  G         A G C C       G A G A G     C
  C           | | |                 T T
  C         A C G G
    A T A          G     GCGTGGCGCAAGTCACAC
                    C   A
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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