The detailed information of tRNA gene sequence


Sequence ID>WENV170977904
Genome IDMTKZ01034973
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 290
End posion on genome 202
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tgtccgcatt
tRNA gene sequence 
GGAGAGGTGCCGGAGCGGTTGAACGGGGCGGTCTCGAAAACCGTTATAGAGGTCTCCTCT
ATCGTGGGTTCGAATCCCACCCTCTCCGCag
Downstream region at tRNA end position 
agcacaaatc
Secondary structure (Cloverleaf model)
>WENV170977904	Ser	CGA
                   t      GCag agcacaaatc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G G C C       G T G G G     C
    G         | | |                 T T
    T       A C G G
      T G A        G     TATAGAGGTCTCCTCTATC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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