The detailed information of tRNA gene sequence


Sequence ID>WENV170977907
Genome IDMTKZ01035113
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 961
End posion on genome 1047
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
ctttttgtgt
tRNA gene sequence 
GCCGAAGTGGCGGAATTGGTAGACGCGCTAGGTTCAGGGTCTAGTAGGCGTGCGCCTGTG
CTGGTTCAAATCCAGTCTTCGGCACCA
Downstream region at tRNA end position 
ttttttatca
Secondary structure (Cloverleaf model)
>WENV170977907	Leu	CAG
                   t      ACCA ttttttatca
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     T G A C C     A
      T A A        G      + | | | |     A
    T       G G C G       G C T G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TAGGCGTGCGCCTGT
                    C - G
                    T - A
                    A - T
                    G - C
                    G + T
                  T       G
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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