The detailed information of tRNA gene sequence


Sequence ID>WENV170977914
Genome IDMTKZ01035274
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 5847
End posion on genome 5941
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ctccgccctc
tRNA gene sequence 
GGGAGGGTGAAGGATCCGGTGATCCTTCCGGACTTCAAATCCGGTATGGGGCTATAAACG
TCCCGGATGGGTTCGACTCCCATACCTTCCCGCCA
Downstream region at tRNA end position 
ctccccttcc
Secondary structure (Cloverleaf model)
>WENV170977914	SeC(p)	TCA
                   c      GCCA ctccccttcc
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T
                     G - C
                     G - C
                     T - A          T C
                    G     T A C C C     A
      C C T        A      | | | | |     G
    G       A G G A       A T G G G     C
    G       | | | |                 T T
    T       T C C T
      G A          T     TATGGGGCTATAAACGTCCCGG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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