The detailed information of tRNA gene sequence


Sequence ID>WENV170977917
Genome IDMTKZ01035354
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 4095
End posion on genome 4020
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
nnnnnnnnnt
tRNA gene sequence 
GGCGGATTCGTCTAGGGGCCCAGGATATCGCCCTCTCAAGGCGGAGACACGGGTTCGAAT
CCCGTATCCGCTACCA
Downstream region at tRNA end position 
cgcaaagccc
Secondary structure (Cloverleaf model)
>WENV170977917	Glu	CTC
                   t      ACCA cgcaaagccc
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     T G C C C     A
      G G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | +                 T T
    C       G G A T
      C C A        A     AGAC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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