The detailed information of tRNA gene sequence


Sequence ID>WENV170977922
Genome IDMTKZ01035541
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1263
End posion on genome 1188
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
gcagatttat
tRNA gene sequence 
GCTCCCGTCGTCCAGCGGTCTAGGACATCGTCCTTTCAAGGCGGAAACCGGGGTTCAAAC
CCCCGCGGGAGCGCCA
Downstream region at tRNA end position 
acttcgtttg
Secondary structure (Cloverleaf model)
>WENV170977922	Glu	TTC
                   t      GCCA acttcgtttg
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C          C A
                    T     G C C C C     A
      C G A        C      | | | | |     A
    G       C C T G       C G G G G     C
    G       | | | |                 T T
    T       G G A C
      C T A        A     AAAC
                    T + G
                    C - G
                    G - C
                    T + G
                    C - G
                  C       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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