The detailed information of tRNA gene sequence


Sequence ID>WENV170977927
Genome IDMTKZ01035732
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2358
End posion on genome 2282
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
ccctgtcgcT
tRNA gene sequence 
CGGGGCGTGGCGCAGTTTGGCTAGCGCGCTTGACTGGGGGTCAAGAGGTCGCAGGTTCAA
GTCCTGTCGCCCCGATtt
Downstream region at tRNA end position 
tcccaattcc
Secondary structure (Cloverleaf model)
>WENV170977927	Pro	GGG
                   T      ATtt tcccaattcc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T G T C C     A
    T T G A        G      + | | | |     A
  T         C G C G       G C A G G     C
  G         | | | |                 T T
  G         G C G C
    C T A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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