The detailed information of tRNA gene sequence


Sequence ID>WENV170978025
Genome IDMTKZ01038390
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2371
End posion on genome 2459
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ggcgcttttt
tRNA gene sequence 
GGAGAGATGTCCGAGTGGTTTAAGGAGCACGCTTGGAAAGCGTGTGTAGGCTTATACCCT
ACCCGGGGTTCGAATCCCCGTCTCTCCGCan
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170978025	Ser	GGA
                   t      GCan nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     G C C C C     A
      T G A        G      | | | | |     G
    G       G C C T       C G G G G     C
    G         | | |                 T T
    T       A G G A
      T T A        G     TGTAGGCTTATACCCTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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