The detailed information of tRNA gene sequence


Sequence ID>WENV170978026
Genome IDMTKZ01038435
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3444
End posion on genome 3370
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cttgttctgt
tRNA gene sequence 
GGGGGCGTGGTGTAGTGGTCAAACATGCGGCCCTGTCAAGGCCGAGACCGCGGGTTCAAA
TCCCGTCGCTCCCGCtc
Downstream region at tRNA end position 
aaaaagaaac
Secondary structure (Cloverleaf model)
>WENV170978026	Asp	GTC
                   t      GCtc aaaaagaaac
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C          T A
                    T     T G C C C     A
      T G A        G      + | | | |     A
    G       T G T G       G C G G G     C
    G       | | | +                 T T
    T       A C A T
      C A A        G     AGACC
                    C - G
                    G - C
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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