The detailed information of tRNA gene sequence


Sequence ID>WENV170978054
Genome IDMTKZ01039499
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 6197
End posion on genome 6268
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
attgacctac
tRNA gene sequence 
GGGCGATTAACTCAGCGGTAGAGTGCTACCTTCACACGGTAGAAGTCAGAGGTTCAAGTC
CTCTATCGCCCAttc
Downstream region at tRNA end position 
ctccctcctc
Secondary structure (Cloverleaf model)
>WENV170978054	Val	CAC
                   c      Attc ctccctcctc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T G
                    T     T C T C C     A
        G A        A      | | | | |     A
      C     C T C A       A G A G G     C
      G     | | | |                 T T
      G     G A G T
        T A        G     AAGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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