The detailed information of tRNA gene sequence


Sequence ID>WENV170978069
Genome IDMTKZ01039911
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 21924
End posion on genome 21849
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
gcggtcttaa
tRNA gene sequence 
GGGGTTGTAGCTCAGCTGGGAGAGCGCCTGAATGGCATTCAGGAGGTCAGGGGTTCGATC
CCCCTCAGCTCCACCA
Downstream region at tRNA end position 
aaaagtaagg
Secondary structure (Cloverleaf model)
>WENV170978069	Ala	GGC
                   a      ACCA aaaagtaagg
                     G - C
                     G - C
                     G + T
                     G - C
                     T + G
                     T - A
                     G - C          C T
                    T     T C C C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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