The detailed information of tRNA gene sequence


Sequence ID>WENV170978073
Genome IDMTKZ01039925
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1088
End posion on genome 1014
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tcgttcattt
tRNA gene sequence 
GCCCCCATCGTCTACCGGTTAGGACATCAGGTTCTCATCCTGGAAATCGGGGTTCGATTC
CCCGTGGGGGTGCCA
Downstream region at tRNA end position 
ttttcggccc
Secondary structure (Cloverleaf model)
>WENV170978073	Glu	CTC
                   t      GCCA ttttcggccc
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T T
                    T     G C C C C     A
      C C A        C      | | | | |     G
    G       T C T G       C G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          A     AAAT
                    T + G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       T
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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