The detailed information of tRNA gene sequence


Sequence ID>WENV170978082
Genome IDMTKZ01040157
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1565
End posion on genome 1641
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
gcattgattg
tRNA gene sequence 
GGACGACTAGCTCAGCTGGTCAGAGCATCTCGTTTACACCGAGAGGGTCACAGGTTCGAA
TCCTGTGTCGTCCACCA
Downstream region at tRNA end position 
tccattgtaa
Secondary structure (Cloverleaf model)
>WENV170978082	Val	TAC
                   g      ACCA tccattgtaa
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C
                     A - T
                     C - G          T A
                    T     T G T C C     A
      C G A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    C - G
                    G - C
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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