The detailed information of tRNA gene sequence


Sequence ID>WENV170978084
Genome IDMTKZ01040175
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2516
End posion on genome 2440
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
caacgcaacc
tRNA gene sequence 
GGGCGTGTAGCTCAGTTGGTTAGAGCGCGTCCCTGATAAGGACGAGGTCACTGGTTCGAC
TCCAGTCACGCCCACCA
Downstream region at tRNA end position 
accttcccgt
Secondary structure (Cloverleaf model)
>WENV170978084	Ile	GAT
                   c      ACCA accttcccgt
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     G - C          T C
                    T     T G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    G - C
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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