The detailed information of tRNA gene sequence


Sequence ID>WENV170978091
Genome IDMTKZ01040348
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1534
End posion on genome 1459
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nnnnnngttc
tRNA gene sequence 
GGGGCGGTAGCTCAGTGGTTAGAGCACGGGACTCATAATCCCTCGGTCGTGGGTTCGATC
CCCATCCGCCCCACTA
Downstream region at tRNA end position 
ccaggcacga
Secondary structure (Cloverleaf model)
>WENV170978091	Met	CAT
                   c      ACTA ccaggcacga
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C          C T
                    T     T A C C C     A
      T G A        A      + | | | |     G
    G       C T C G       G T G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     CGGTC
                    C   T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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