The detailed information of tRNA gene sequence


Sequence ID>WENV170978103
Genome IDMTKZ01040657
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2832
End posion on genome 2745
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gcaggtaaat
tRNA gene sequence 
GGAAGGGTGGCCGAGCGGTTTAAGGCGCCTGTCTTGAAAACAGGTTTGGTGAAAGCCAAC
GTGGGTTCGAATCCCTCCCCTTCCGCCA
Downstream region at tRNA end position 
caacctgagc
Secondary structure (Cloverleaf model)
>WENV170978103	Ser	TGA
                   t      GCCA caacctgagc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      |   | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TTTGGTGAAAGCCAAC
                    C - G
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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