The detailed information of tRNA gene sequence


Sequence ID>WENV170978104
Genome IDMTKZ01040657
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2713
End posion on genome 2621
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctgaatacat
tRNA gene sequence 
GGGGAGGTGCCGGAGTGGCCGAACGGGATCGCCTGCTAAGTGATTGTCGGGCTTTAAACT
CGACCGGGGGTTCGAATCCCCCCCTCCCCGCCA
Downstream region at tRNA end position 
gaatatacga
Secondary structure (Cloverleaf model)
>WENV170978104	Ser	GCT
                   t      GCCA gaatatacga
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G G C C       G G G G G     C
    G         | | |                 T T
    C       A C G G
      C G A        G     TGTCGGGCTTTAAACTCGACC
                    A - T
                    T - A
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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