The detailed information of tRNA gene sequence


Sequence ID>WENV170978109
Genome IDMTKZ01040909
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 352
End posion on genome 265
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atgggagcac
tRNA gene sequence 
GGAGGCGTCGCATAGTGGCCTAGTGCGCCCGCCTGCTAAGTGGGTTGGGGGTAAAACCCC
TCGCGGGTTCAAATCCCGCCGCCTCCGCtc
Downstream region at tRNA end position 
tcggccctcg
Secondary structure (Cloverleaf model)
>WENV170978109	Ser	GCT
                   c      GCtc tcggccctcg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C G C C C     A
      T G A        C      | | | | |     A
    G       T A C G       G C G G G     C
    G       + | | |                 T T
    C       G T G C
      C T A        G     TTGGGGGTAAAACCCCTC
                    C - G
                    C - G
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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